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3 Departments of Nutritional Sciences and 4 Veterinary Science and Microbiology, University of Arizona, Tucson, AZ 85721
* To whom correspondence should be addressed. E-mail: donato{at}u.arizona.edu.
| ABSTRACT |
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| Introduction |
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Increased levels of cyclooxygenase-2 (COX-2) have been associated with inflammation and the etiology of a variety of tumors, including breast cancer (16–18). Therefore, the regulation of COX-2 is a viable target for dietary prevention strategies. Recently, we reported that the promoter activity of the COX-2 gene was induced by AhR ligands (5) and this activation was paralleled by increased binding of the AhR to XRE in the COX-2 promoter. The transcriptional activation of the COX-2 gene has been linked to changes in chromatin modifications, including histone acetylation by histone acetyl transferases (19,20). Similarly, the recruitment of the AhR to target promoter genes such as CYP1A1 has been associated with the recruitment of transcription coactivators and chromatin modifications (4,21). However, it is not known whether the binding of the AhR to the COX-2 promoter recruits coactivators and if this is associated with chromatin reorganizations at the COX-2 gene. Therefore, we hypothesized that the recruitment of the AhR to the COX-2 promoter induces chromatin modifications that activate COX-2 transcription, whereas dietary compounds that target the AhR may exert antagonistic effects and prevent the activation of COX-2 expression. To test this hypothesis, we challenged MCF-7 cells with the AhR ligand TCDD and examined the kinetics of recruitment of the AhR and its cofactor p300 to the COX-2 promoter along with changes in acetylated histone H4 (AcH4). We also examined the antagonistic effects of DIM on AhR and AcH4 recruitment to the COX-2 promoter and COX-2 expression. We conclude that DIM is an effective dietary agent to prevent epigenetic activation of COX-2 expression by AhR agonists.
| Materials and Methods |
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DNA-protein binding (pull-down) assay. The binding of nuclear proteins to selected oligonucleotides was evaluated as described previously (5). Briefly, nuclear extracts were prepared using the NE-PER Nuclear and Cytoplasmic Extraction reagents (Pierce Biotechnology), quantitated using the BCA Protein Assay kit (Pierce Biotechnology), and incubated with biotin-labeled, double-stranded DNA oligonucleotides and streptavidin agarose beads. Following dissociation, bound nuclear proteins were separated by SDS-PAGE and analyzed by Western blot analysis with an antibody against the AhR (Santa Cruz Biotechnology no. sc-5579). Sequences of biotin-labeled oligonucleotides (Sigma) were: COX-2/XRE1, sense: 5'-CTGTCCCGACGTGACTTCCTC-3', antisense: 5'-GAGGAAGTCACGTC GGGACAG-3'; CYP1A1: sense, 5'-CGGCT CTTGTCACGCAACTCCGAGCTCA-3'; antisense: 5'-TGAGCTCGGAGTTGCGTG AGAAGAGCCG-3' (5).
Small inhibitory RNA for AhR. Small inhibitory RNA (siRNA) duplexes for the AhR (siAhR) were synthesized by Dharmacon using the sequences previously described (AhR: 5'-UACUUCCACCUCAGUUGGCTT-3' and 3'-TTAUGAAGGUGGAGUCAACCG-5') (22). The siRNA duplexes were transfected into MCF-7 cells using Lipofectamine 2000 according to the protocol provided by the manufacturer (Invitrogen). Nontargeting siRNA (siCON) and siRNA for human glyceraldehyde-3-phosphate (GADPH) (siGADPH) were purchased from Dharmacon. Following transfection, the media was replaced with DMEM (10% FBS) and cells were allowed to grow for 48 h. Cells were then treated with either a vehicle control or TCDD and harvested either to prepare total cell lysates for Western blot analysis or nuclear extracts for DNA protein-binding assays.
Chromatin immunoprecipitation assay and quantitative real-time PCR for chromatin immunoprecipitation studies. Following treatment and formaldehyde cross-linking, MCF-7 cells were harvested and the chromatin immunoprecipitation (ChIP) assay was performed using the EZ ChIP kit according to the manufacturer's protocol (Millipore). Chromatin was immunoprecipitated with antibodies against the AhR (Biomol no. SA-210), p300 (Millipore no. 05-257), AcH4 (Millipore no. 06-598), or IgG as a negative control. Input and bound DNA were purified using the Qiagen Nucleotide Removal kit and amplified by quantitative real-time PCR (qPCR) using the SYBR Green PCR Reagents kit as described by the manufacturer (Applied Biosystems). Briefly, reactions were run at a final volume of 25 µL consisting of the following master mix: 12.5 µL of 2x SybrGreen buffer, 1 µL each of forward (5'-CAGCCTATTAAGCGTCGTCAC-3') and reverse (5'-CCGTGTCTGGTCTGTACGTCT-3') primers that flank the COX-2 XRE-1, nuclease free water, and 5 µL DNA purified from the ChIP assay. The standard curve was generated using a plasmid containing the COX-2 promoter. Bound DNA was normalized to input DNA.
RNA isolation and qPCR for COX-2 mRNA. Total cellular RNA was extracted using Tri-Reagent (Molecular Research Center) according to the manufacturer's instructions. After synthesis of the first-strand cDNA by RT (Fermentes), qPCR was performed with the following primers: (COX-2 mRNA forward) 5'-AGGGTTGCTGGTGGTAGGAA -3' and (COX-2 mRNA reverse) 5'- GGTCAATGGAAGCCTGTGATACT-3'. We used the 18S ribosomal RNA amplification product as an internal standard. The COX-2 standard curve was generated with the plasmid pSG5-COX-2 containing a cDNA for the human COX-2 gene.
Statistical analysis.
Statistical analysis was performed using Statview from the SAS Institute. Densitometry after Western blotting was performed using Kodak ID Image Analysis Software. Data from factorial experiments were analyzed by 2-way ANOVA. Post hoc multiple comparisons were run using Fisher's protected least significant different test. Data are presented as means ± SE and differences were considered significant at P
0.05.
| Results |
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200% (P < 0.01) within 15 min and declined to near-control levels after 45 min. Subsequent increases (
100-130%; P < 0.01) in AhR binding occurred at 60 and 90 min post-treatment with TCDD.
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200%; P < 0.01) in p300 occupancy at the COX-2 promoter. However, the recruitment of p300 was reduced to near basal levels at 30 min. An additional increase in p300 recruitment occurred at 60 min, although this accumulation did not differ compared with time 0 (Fig. 3B). Because the cofactor p300 possesses histone acetyl transferase activity, we monitored the recruitment of AcH4 to the COX-2 promoter. The association of AcH4 followed a cyclical pattern similar to that of AhR and p300 (Fig. 3B). The treatment with TCDD induced the occupancy of AcH4 at 15 and 30 min (
200%; P < 0.01) and was followed by a significant (P < 0.01), albeit smaller, increase (
80%) in AcH4 association at 60 and 90 min. These cumulative results indicated that binding of the AhR at the COX-2 promoter was coordinated with the recruitment of its cofactor p300 and acetylation of histone-H4. DIM antagonizes the binding of the AhR to the COX-2 promoter. Previous studies have investigated the chemopreventative effects of synthetic and naturally occurring compounds that target the AhR (13,21). However, to date, no studies have characterized the effects of DIM on activation of the COX-2 gene by the AhR. The results of DNA pull-down experiments indicated that the treatment with DIM alone did not alter the basal binding of the AhR to the COX-2 promoter (Fig. 4A), but it inhibited TCDD-induced association of the AhR in a dose-dependent fashion (20 > 10 > 5 µmol/L; P < 0.01). In parallel experiments, only concentrations of 10 and 20 µmol/L RES were effective at reducing the TCDD-induced binding of the AhR to the COX-2 promoter oligonucleotide (Fig. 4B) but were less effective than equimolar doses of DIM (P < 0.01). Interestingly, the treatment with RES alone increased the association of the AhR with the COX-2 oligonucleotide. Using the synthetic AhR antagonist 3M4NF as a positive control for DIM and RES, we found that 3M4NF reduced the TCDD-induced binding of the AhR to the COX-2 and CYP1A1 promoter oligonucleotides (Fig. 4C). These cumulate data indicated that at equimolar concentrations DIM was more effective than RES in antagonizing the recruitment of the AhR to the COX-2/XRE-1.
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| Discussion |
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The binding of the AhR to a core sequence (GCGTG) harbored in the COX-2 and control CYP1A1 promoters was induced by TCDD. Conversely, the transfection with siRNA for the AhR reduced AhR binding to COX-2 oligonucleotides. In addition, the association of the AhR with the COX-2 promoter and control CYP1A1 oligonucleotides was reduced by the cotreatment with the synthetic AhR antagonist 3M4NF. Our data corroborated those of previous studies documenting repression by 3M4NF of AhR nuclear translocation and COX-2 expression in human lung fibroblasts treated with cigarette smoke extracts (27). In ChIP experiments with MCF-7 cells, the TCDD-induced association of the AhR with the COX-2 promoter occurred rapidly (
15 min). The increased occupancy of the AhR was paralleled by enhanced recruitment of p300 and AcH4. Patterns of rapid (
15-30 min) recruitment of AhR, p300, and AcH4 have been reported in previous studies for the CYP1A1 promoter (21). Previous studies have documented increased binding of p300 and acetylation of histone H4 at the COX-2 promoter under diabetic conditions (19) or following the exposure of human bronchial epithelial cells to exhaust particles (20). Therefore, the coordinated recruitment of the AhR, p300, and histone H4 acetylation may play an important role in the activation of COX-2 expression.
The current findings suggest that the AhR-mediated activation of COX-2 expression may be an important molecular target for dietary intervention. Dietary compounds that have been investigated for their role as putative AhR ligands include naringenin, flavone, catechin, quercetin, kaempferol (10,11), RES (14,28), and red clover isoflavones (29). We examined the effects of DIM, a derivative of I3C found in cruciferous vegetables, and found that DIM inhibited the TCDD-induced binding of the AhR to the COX-2 promoter, with no effect on basal AhR recruitment. In ChIP experiments, we confirmed that the cotreatment with DIM (10 µmol/L) reduced the TCDD-induced occupancy of the AhR and AcH4 to the COX-2 promoter. Moreover, the cotreatment with DIM repressed the TCDD-induced expression of COX-2 mRNA and protein. One important question is whether or not DIM may reach sufficient levels in human serum to exert antagonistic effects against the AhR. Unfortunately, the information concerning the achievable levels of DIM in human is scarce. Nevertheless, previous investigations indicated that the concentrations of DIM and RES that were effective in this study (
10 µmol/L) were similar to those used in previous investigations (28) and approximated dietary levels of phytochemicals (30) used to inhibit AhR activation by dioxin (31). Moreover, the compound DIM was the only I3C-derived product detectable in plasma samples of women receiving oral doses of 400-1200 mg I3C (32). Interestingly, a previous investigation of breast cancer MCF-7 cells reported that at higher concentrations (100 µmol/L), the treatment with DIM exerted agonistic effects and stimulated AhR recruitment to the CYP1A1 promoter and CYP1A1 mRNA expression (21). In contrast, in the current study, the treatment of MCF-7 cells with lower doses of DIM (5-10 µmol/L) did not change basal occupancy of the AhR at the COX-2 promoter while lowering basal COX-2 mRNA levels.
Our results complement those of in vivo investigations of RES, which reduced COX-2 expression in mammary (33) and esophageal (34) tumors and prevented mammary cancers in rats induced by the AhR-ligand 7,12-dimethylbenz[a]anthracene (35). Interestingly, we observed that DIM at equimolar concentrations (5-20 µmol/L) was more effective than RES at antagonizing the TCDD-induced recruitment of the AhR. In fact, RES increased basal AhR binding to the COX-2 promoter. The latter result could be due to the higher affinity of RES for the AhR (14,36) compared with that of DIM (13). These cumulative data point to relative binding affinity for the AhR and dose as important factors in determining whether natural dietary AhR ligands may exert agonistic or antagonistic effects.
In summary, our results document that the exposure to dietary AhR ligands resulting from xenobiotic sources such as the dioxin prototype, TCDD, induce COX-2 expression. Because constitutive activation of the AhR may contribute to mammary tumorigenesis (26), the present study illustrates a mechanism for upregulation of COX-2 expression through an AhR-dependent pathway and offers a potential target for prevention and treatment with naturally occurring dietary AhR antagonists. Whereas contradictory results from animal studies have raised caution against the use of DIM for cancer prevention in humans (37), this study suggests that DIM may exert important preventative properties against epigenetic activation of COX-2 expression by AhR agonists, including dioxins and PAH, found in processed foods and cooked meats. We are currently investigating the effects of AhR recruitment on other chromatin remodeling events such as histone phosphorylation and methylation at the COX-2 gene and the preventative effects of DIM against AhR-dependent COX-2 activation in preclinical models.
| ACKNOWLEDGMENTS |
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| FOOTNOTES |
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2 Author disclosures: S. C. Degner, A. J. Papoutsis, O. Selmin, and D. F. Romagnolo, no conflicts of interest. ![]()
5 Abbreviations used: AcH4, acetylated histone-H4; AhR, aryl hydrocarbon receptor; ChIP, chromatin immunoprecipitation assay; COX-2, cyclooxygenase-2; DIM, 3,3'-Diindolylmethane; FBS, fetal bovine serum; GADPH, glyceraldehyde-3-phosphate; I3C, indole-3-carbinol; 3M4NF, 3-methoxy-4-naphthoflavone; PAH, polycyclic aryl hydrocarbon; qPCR, quantitative real-time PCR; RES, resveratrol; siAhR, small inhibitory RNA duplexes for the AhR; siCON, nontargeting small inhibitory RNA; siGADPH, small inhibitory RNA for human glyceraldehyde-3-phosphate; siRNA, small inhibitory RNA; TCDD, 2,3,7,8 tetrachlorodibenzo(p)dioxin; XRE, xenobiotic responsive element. ![]()
Manuscript received 3 September 2008. Initial review completed 25 September 2008. Revision accepted 28 October 2008.
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