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© 2003 The American Society for Nutritional Sciences J. Nutr. 133:2682-2687, August 2003


Nutrition and Cancer

Down-Regulation of Proliferating Cell Nuclear Antigen Gene Expression Occurs during Cell Cycle Arrest Induced by Human Fecal Water in Colonic HT-29 Cells

Huawei Zeng2 and Cindy D. Davis

U.S. Department of Agriculture, Grand Forks Human Nutrition Research Center, Grand Forks, ND 58202-9034

2To whom correspondence should be addressed. E-mail: hzeng{at}gfhnrc.ars.usda.gov.


    ABSTRACT
 TOP
 ABSTRACT
 MATERIALS AND METHODS
 RESULTS
 DISCUSSION
 LITERATURE CITED
 
Cancer is a disease in which the cell cycle is altered, and the elucidation of the mechanisms by which constituents of human fecal water influence the cell cycle can lead to noninvasive measurement of colon cancer risk. The purpose of the present study was to investigate the effect of human fecal water on HT-29 cell-cycle progression with sodium selenite as a reference for comparison. Both human fecal water (2.5–5.0%) and selenite (3–4 µmol/L) significantly inhibited cell growth. Cell-cycle analysis revealed that human fecal water decreased the proportion of S + G2 phase cells and increased that of G1 phase cells. In contrast, selenite decreased G1 phase cells and increased proportions of S and G2 phase cells. Both 5% human fecal water and 4 µmol/L selenite greatly increased the mRNA level of the cyclin-dependent kinase inhibitor gene p21waf1. Interestingly, the mRNA levels of cyclin A and proliferating cell nuclear antigen (PCNA) were dramatically decreased by 69 and 62%, respectively, in HT-29 cells treated with fecal water but not selenite. In contrast, the mRNA level of DNA damage-inducible transcript 1, gadd45, was significantly increased by 2.28-fold in HT-29 cells treated with selenite but not fecal water. Furthermore, a PCNA gene promoter was cloned into a luciferase reporter construct and its activity was significantly reduced in a dose-dependent manner in cells treated with fecal water but not selenite. Collectively, these results suggest that human fecal water and selenite can differentially induce growth arrest genes, and that PCNA gene expression is uniquely and highly sensitive to human fecal water.


KEY WORDS: • human fecal water • selenium • cell cycle • colon cell

The colonic epithelium is in an equilibrium between cell proliferation and cell death. Alterations in the control of cell cycle progression and programmed cell death (apoptosis) have been implicated in many human diseases including cancer (1). Colon cancer results from the accumulation of mutations in certain genes that control cell cycle, apoptosis and DNA repair (2). The association between colon cancer and diet has been well established in human epidemiologic studies as well as in animal studies (3,4).

Recently, there has been considerable interest in the role of the aqueous phase of human feces (fecal water) in studies examining the mechanisms underlying the dietary etiology of colon cancer (513) because components of this fecal fraction are in direct contact with colonic epithelial cells. Dietary factors have been shown to significantly affect the cytotoxicity and genotoxicity of fecal water (613). This cytotoxicity has been hypothesized to cause epithelial cell loss in the large bowel, resulting in increased cell proliferation, which may be linked to a higher risk for the development of colon cancer (14,15). A preliminary study suggested that human fecal water fractions could induce apoptosis in HT-29 colon adenocarcinoma cells (16). Furthermore, components of fecal water have been shown to alter specific genes that control the cell cycle, apoptosis and DNA repair (11,12), thus suggesting that some components of fecal water might be protective against cancer.

Selenium, an essential trace element for humans, can either stimulate or inhibit cell growth depending on its concentration and chemical form (17). At concentrations greater than nutritional requirements, selenium has either anticancer effects through cell cycle arrest and apoptosis pathways or toxic effects through cell necrosis pathways (18,19). The alteration of cell cycle progression and apoptosis triggered by selenium has been implicated as an important mechanism for its anticancer effects in mammary and prostate cells (2022). Because selenium is not absorbed completely, it is likely that the element is present in the hindgut, particularly when high doses are consumed. However, only a few studies have looked at the effect of selenium on cell cycle progression in colonic cells (23,24).

In view of the putative role of alterations in cell cycle progression in colon cells during tumor development, it is important to understand the mechanisms by which human fecal water and selenium can affect this outcome. Because of the remarkable efficacy of sodium selenite in inducing cell growth arrest and showing cancer prevention in other cell types, sodium selenite was included as a reference for comparison in the present study. The following studies were conducted to investigate the molecular basis of the effect of human fecal water and selenite on HT-29 cell cycle progression.


    MATERIALS AND METHODS
 TOP
 ABSTRACT
 MATERIALS AND METHODS
 RESULTS
 DISCUSSION
 LITERATURE CITED
 
Chemicals.

Sodium selenite, dithiothreitol and propidium iodide (PI) were purchased from Sigma Chemical (St. Louis, MO). Cytidine 5'-triphosphate ({alpha}-32P) was purchased from Amersham Pharmacia Biotech (Piscataway, NJ). Oligonucleotides were synthesized by Gibco BRL (Rockville, MD).

Fecal water collection.

The study participants were the same 20 healthy men (including 3 individuals who attended only the equilibration period) from the previous study (13). Fecal water from all 20 men was prepared by modifying a published procedure (6) during the 1-wk equilibration period. As reported, during that period, they consumed a controlled mixed Western diet with adequacy in all known nutrients (13). Briefly, fecal samples were stored at 4°C for <12 h, and homogenized with a Masticator homogenizer (IUL Instruments, Barcelona, Spain) for 2 min; fecal water was prepared by centrifuging the sample for 2 h at 30,000 x g at 4°C. The supernatant was decanted and centrifuged again at 30,000 x g for 15 min at 4°C. The supernatant was then filtered through a 149-µm Nitex filter, and the samples were stored at -80°C. The procedure does not involve further isolation of the fractions of different components in fecal water, and should reflect the intact free water in the stool. To decrease the day-to-day variability among samples, individual composites for each subject were made from all of the fecal water. To minimize the subject-to-subject variability among samples, three composite pools from 3 subjects, 8 subjects and 9 subjects, respectively, were made and used in this study. Before cell treatment, fecal water was filtered through a 0.2-µm sterile filter (Pall, Ann Arbor, MI).

Cell culture and cell growth.

HT-29 cells were maintained in DMEM media (GIBCO-BRL, Grand Island, NY) with 10% (v/v) fetal bovine serum (FBS) in a humidified atmosphere 95% air/5% CO2 at 37°C, and cell passage was between 133 and 150. Cells (3 mL) were seeded at 1.5–2 x 108 cells/L into each well of a 6-well plate. After 24 h, human fecal water, selenite or an equal volume of PBS buffer was added to study the effect on cell cycle/growth. The concentration of human fecal water in DMEM media was measured as a percentage (v/v). Cells were counted by a hemocytometer. Cells that excluded trypan blue after incubation with an equal volume of PBS containing 4 g/L trypan blue dye were considered viable.

Cell cycle analysis.

Cell cycle was analyzed by using flow cytometry with PI staining. HT-29 cells were tryspinized and washed once with PBS and incubated in 70% (v/v) ethanol at -20°C. After the incubation, cells were washed with PBS and stained with 50 mg PI/L with 6000 U RNase A/L. The DNA contents of cells were determined by flow cytometry. Data were stored as list-mode files of at least 10,000 single-cell events and analyzed by EPICS profile II and ModFit LT software (Coulter, Miami, FL and Topsham, ME).

Gene array and RT-PCR assay.

Total cellular RNA was isolated from HT-29 cells by using an RNeasy Mini Kit (Qiagen, Valencia, CA) according to the manufacturer’s instructions, and the integrity of RNA samples was checked by electrophoresis. Each cDNA probe was prepared from 5 µg of total cellular RNA, and hybridized to Human Cell cycle-1 GEArray membrane (Superarray, Bethesda, MD). These membranes contain 23 sequence-verified known cell cycle–related genes. Each cell cycle–related gene was normalized by 10% of the ß-actin signal in the same membrane, and only those gene signals (~10% of the ß-actin signal) that were well above the background were considered specific gene signals. These data were collected, stored and analyzed with Molecular Dynamics Image-Quant system (Sunnyvale, CA). To confirm the data generated by gene array analysis, an RT-PCR (~20–25 cycles) (Promega, Madison, WI) assay was performed (25) with the ß-actin gene as an internal control. Briefly, three independent RNA samples were isolated from HT-29 cells, and RNA template samples were serially diluted to make sure that RT-PCR products were within a linear range. Therefore, the intensity of RT-PCR products directly correlated with the mRNA level of proliferating cell nuclear antigen (PCNA), gadd45 or p21 gene. The primer pairs were as follows: ß-actin primers: 5'-ATG GGT CAG AAG GAT TCC TAT G-3'; 5'-CAG CTC GTA GCT CTT CTC CA-3; PCNA primers: 5'-CCA TCC TCA AGA AGG TGT TGG-3'; 5'-GTG TCC CAT ATC CGC AAT TTT AT-3'; DNA damage–inducible transcript 1 (Gadd45) primers: 5'-GCA ATA TGA CTT TGG AGG AAT TC-3'; 5'-CCA TCA CCG TTC AGG GAG ATT-3'; p21 primers: 5'-ACT GTG ATG CGC TAA TGG CG-3'; 5'-TTT GAG GCC CTC GCG CTT C-3'.

Analysis of PCNA promoter activity and transient transfection.

A fragment of genomic DNA containing the 5'-flanking sequence, first exon and partial first intron (26) was generated by Pfu enzyme (Stratagene, La Jolla, CA) with primers 5'-TAC GAG CGC ATC AAT TCT GTA AT-3; 5'-CCA ACA GGT TTA GTG AGC AAA GA-3'. The 1121-bp PCR fragments were cloned into the polylinker (SmaI site) of the pGL3 reporter vector (Promega), and the orientation was confirmed by obtaining the predicted fragment size after PCR with insert and vector primers. Cells were transiently transfected with PCNA promoter construct, pRL-null vector (Promega), OPTI-MEM I and lipofectamine reagent for 4 h and then placed in culture media for 16 h before being exposed to human fecal water or selenite for 24 h. The cells were lysed and assayed for reporter gene activity using the Luciferase Assay Reagent according to the manufacturer’s instructions (Promega). Luciferase activity was measured in a luminometer (Turner Designs, Sunnyvale, CA). The expression levels of the luciferase reporter protein in the transfected cells were normalized in reference to Renilla luciferase activity in the same cells.

Statistical analysis.

Results are given as means ± SEM. Statistical analyses were performed by one-way ANOVA followed by Dunnett’s multiple comparisons to the control group. Differences with a P-value < 0.05 were considered significant.


    RESULTS
 TOP
 ABSTRACT
 MATERIALS AND METHODS
 RESULTS
 DISCUSSION
 LITERATURE CITED
 
Cell growth and the cell cycle.

There was a decrease in the growth of HT-29 cells treated with human fecal water or sodium selenite (Fig. 1). Interestingly, the G1 phase cell distribution increased, and the S + G2 phase cell distribution decreased in cells treated with fecal water (Fig. 2; Table 1). In contrast, the S + G2 phase cell distribution increased and the G1 phase cell distribution decreased in selenite-treated cells (Fig. 2; Table 1).



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FIGURE 1 Effect of human fecal water (FW) and sodium selenite (Se) on the growth of HT-29 cells for 24 h. Values are means ± SEM, n = 6. *Different from control, P < 0.0001.

 


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FIGURE 2 Flow cytometric profiles show cell cycle phase distribution of HT-29 cells in the presence of human fecal water (FW) or sodium selenite (Se) for 24 h. The data are from one experiment of six that yielded similar results.

 

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TABLE 1 Comparison of cell cycle phase-distributions of HT-29 cells treated with human fecal water (FW) or sodium selenite (Se) for 24 h1,2

 
Gene expression.

Gene array analysis showed that the mRNAs were expressed at different levels in human fecal water and selenite-treated cells. The mRNA levels of cyclin A and PCNA were decreased by 69 and 62%, respectively, in 5% human fecal water treated HT-29 cells. Cyclin A mRNA was not affected and PCNA mRNA was decreased only 28% in selenite-treated HT-29 cells. The mRNA level of gadd45 was increased 2.28-fold in 4 µmol/L sodium selenite–treated HT-29 cells but was not changed in cells treated with human fecal water (Table 2). These results were confirmed by RT-PCR. A weaker mRNA signal of PCNA was seen in HT-29 cells treated with 5% human fecal water compared with control cells treated with PBS buffer (Fig. 3). On the other hand, gadd45 mRNA signals were stronger in HT-29 cells treated with 4 µmol/L sodium selenite than in control cells treated with PBS buffer (Fig. 3). In contrast, p21 mRNA signals were much stronger in HT-29 cells treated with 5% human fecal water or 4 µmol/L sodium selenite than in control cells treated with PBS buffer (Fig. 3).


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TABLE 2 Human cell cycle-1 GEArray analysis of gene expression of HT-29 cells without (control) and treated with 5% human fecal water or 4 µmol/L selenite for 24 h–1, 4

 


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FIGURE 3 Effect of 5% human fecal water (FW) and 4 µmol/L sodium selenite (Se) on proliferating cell nuclear antigen (PCNA), DNA damage inducible transcript 1 (gadd45) and cyclin-dependent kinase inhibitor 1A (p21) gene mRNA abundance in HT-29 cells exposed for 24 h. The PCNA, gadd45 and p21 RT-PCR products were generated from diluted mRNA templates from HT-29 cells treated with human FW or Se. With ß-actin gene signals as an internal control in the assay, the following changes were consistently seen in three independent experiments: 1) weaker signals of PCNA in fecal water-treated HT-29 cells; 2) stronger signals of gadd45 in selenite-treated HT-29 cells; 3) stronger signals of p21 in HT-29 cells treated with human fecal water or selenite compared with control cells.

 
PCNA gene promoter.

With the promoter sequence fused to the reporter plasmid in the correct or reverse (R) orientation, reporter constructs were transiently transfected into HT-29 cells. The correct orientation plasmid displayed ~four- to fivefold higher activity than the reverse orientation construct in HT-29 cells (Fig. 4). This indicated that not only had we succeeded in isolating the promoter region of the PCNA gene, but also that the promoter was active in HT-29 cells. Because HT-29 cells become fragile after DNA transfection, we examined the effect of human fecal water and sodium selenite at concentrations < 5% and 4 µmol/L, respectively, to avoid the induction of cell death. Human fecal water (1.25 or 2.5%) dramatically decreased the activity of the PCNA promoter in a dose-dependent manner (Fig. 4). In contrast, sodium selenite (2 or 3 µmol/L) caused only minor decreases in the PCNA gene promoter activity and the response was not dose dependent.



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FIGURE 4 Effect of human fecal water (FW) and sodium selenite (Se) on the proliferating cell nuclear antigen (PCNA) promoter activity. "Fold induction" is the luciferase activity in control cells and in cells after 24 h treatment with fecal water or selenite with correct orientation constructs relative to the normalized luciferase activity in control cells with reverse orientation constructs. Values are means ± SEM, n = 3. Different from control, * P = 0.03, **P = 0.005, ** **P < 0.0001.

 

    DISCUSSION
 TOP
 ABSTRACT
 MATERIALS AND METHODS
 RESULTS
 DISCUSSION
 LITERATURE CITED
 
This is the first study to examine the molecular basis for the effect of fecal water on cell cycle progression in HT-29 cells. In agreement with previous studies that found that human fecal water (16) or selenite (19) induced apoptosis and inhibited cell growth, the present data demonstrated that as little as 2.5% human fecal water or 3 µmol/L selenite in cultured media significantly reduced cell growth. Interestingly, cell-cycle analysis revealed that 2.5 and 5% human fecal water decreased the proportion of S + G2 phase cells, corresponding to an increase in G1 phase cells. In contrast, 4 µmol/L selenite decreased the proportion of G1 phase cells, corresponding to an increase in the S and G2 phase cells. These observations suggest that although both human fecal water and selenite inhibit cell growth, they are likely mediated through two different mechanisms.

The gene expression of cell cycle–related genes in cells treated with fecal water and selenite was determined via gene array analysis followed by conventional RT-PCR validation of the genes with differential expression >2.0. Our data demonstrated that both human fecal water (5%) and 4 µmol/L selenite greatly increased the mRNA level of the cyclin-dependent kinase inhibitor gene, p21waf1. Interestingly, the mRNA levels of cyclin A and PCNA were dramatically decreased in HT-29 cells treated with fecal water but not selenite. In agreement with the PCNA mRNA levels, human fecal water but not sodium selenite significantly decreased PCNA promoter activity in a dose-dependent manner. In contrast, the mRNA level of the gadd45 was significantly increased in HT-29 cells treated with selenite but not fecal water.

These differential changes observed in the expression of key cell cycle regulatory genes suggest several important molecular effects of human fecal water and selenite on colonic cell cycle progression. First, eukaryotic cell cycle progression is orchestrated by cyclin-dependent kinases (CDK) and proteins that regulate CDK (27,28). The deregulation of their gene expression is directly related to colon cancer risk (2,27). The induction of the p21waf1 is a common mechanism of growth arrest in different physiologic situations (25). p21waf1 consists of at least two functional domains that bind to PCNA and Cdk/cyclins (29). It has been shown that p21waf1 inhibits PCNA-dependent DNA replication by preventing PCNA from contributing to DNA polymerase {delta} and {epsilon} function; it induces G2/M arrest after DNA damage (29) and leads to efficient G1 arrest (30). It is thus conceivable that the up-regulation of p21waf1 mRNA in cells treated with 5% human fecal water or 4 µmol/L sodium selenite is responsible in part for the cell growth arrest in G1 and S + G2-mol/L phase transition, respectively. Second, cyclin A associates not only with cdk1, but also with cdk2, and it is clear that degradation of cyclin A during mitosis is critical for G1 cell cycle arrest (31). Furthermore, the role of PCNA in cell cycle control is related to its interaction with cyclin and CDK (30,32). Therefore, the down-regulation of cyclin A and PCNA mRNAs in cells treated with human fecal water indicates that fecal water negatively affected cyclin A and PCNA gene transcription, consistent with the previous observation of G1 cell cycle arrest (31). In contrast, although sodium selenite also inhibited HT-29 cell cycle progression, it did not greatly affect PCNA and cyclin A mRNA expression. Third, the growth arrest and DNA damage-inducible gene (gadd45) is associated with cell growth inhibition, DNA damage response and DNA repair (33). In agreement with previous findings (34), we observed that sodium selenite induced gadd45 gene transcription. Previous studies have shown that gadd45 interacts with PCNA as well as with the universal cyclin-dependent kinase inhibitor p21, and this interaction is critical for negative growth control (35). In contrast to selenite, human fecal water shows little effect on gadd45 gene expression, suggesting that direct DNA damage is likely responsible in part for selenite but not for cell cycle arrest induced by fecal water.

It is possible that the study of PCNA promoter activity in HT-29 cells exposed to fecal water from humans fed different experimental diets may be utilized as a biomarker of the effect of diet on colon cancer susceptibility. Several reports indicate that the cytotoxicity and genotoxicity of human fecal water are dependent on dietary factors (613). Therefore, it is likely that dietary factors will determine the effect of human fecal water on PCNA promoter activity. In the future, human fecal water obtained from people fed different experimental diets may be used to assess PCNA promoter activity as a potential biomarker of cancer protective components in the fecal water. Because colon cancer risks are affected by numerous dietary factors, it is conceivable that many other fecal water–sensitive genes would be available for future investigation.

In summary, both human fecal water and sodium selenite inhibited HT-29 cell cycle progression. In contrast to the S and G2 cell cycle arrest induced by sodium selenite, human fecal water caused G1 cell cycle arrest. Although both human fecal water and sodium selenite increased the mRNA level of p21waf1, the up-regulation of the gadd45 gene by sodium selenite and the down-regulation of PCNA and cyclin A genes by human fecal water represented distinct mechanisms of cell cycle arrest. Furthermore, the finding that human fecal water inhibited PCNA gene promoter activity in a dose-dependent manner suggests a novel approach for assessing the effect of diet on colon cancer susceptibility.


    ACKNOWLEDGMENTS
 
We thank Young Kim (NIH) and Eric Uthus (USDA) for critical review of the manuscript, and Gerald Combs and Janet Hunt for helpful discussion. The technical support given by James Botnen, Mary Briske-Anderson, Brenda Skinner, Joseph Idso, LuAnn Johnson and Laura Idso is greatly appreciated.


    FOOTNOTES
 
1 The U.S. Department of Agriculture, Agricultural Research Service, Northern Plains Area, is an equal opportunity/affirmative action employer and all agency services are available without discrimination. Mention of a trademark or proprietary product does not constitute a guarantee or warranty of the product by the U.S. Department of Agriculture and does not imply its approval to the exclusion of other products that may also be suitable. Back

3 Present address: National Institutes of Health/NCI, Nutritional Science Research Group, Rockville, MD 20892-7328. Back

4 Abbreviations used: CDK, cyclin-dependent kinase; FBS, fetal bovine serum; gadd45, DNA damage–inducible transcript 1; PCNA, proliferating cell nuclear antigen; PI, propidium iodide; p21waf1, cyclin-dependent kinase inhibitor 1A. Back

Manuscript received 23 February 2003. Initial review completed 18 April 2003. Revision accepted 28 May 2003.


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