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(Journal of Nutrition. 2000;130:377S-381S.)
© 2000 The American Society for Nutritional Sciences


Supplement

Homocysteine Thiolactone: Metabolic Origin and Protein Homocysteinylation in Humans1 ,2

Hieronim Jakubowski

Department of Microbiology & Molecular Genetics, UMDNJ-New Jersey Medical School, Newark, NJ 07103


    ABSTRACT
 TOP
 ABSTRACT
 INTRODUCTION
 Mechanisms of homocysteine...
 Elevation of Hcy levels...
 Metabolism of Hcy thiolactone...
 Protein homocysteinylation
 HDL-associated Hcy thiolactonase...
 Summary: role of homocysteine...
 REFERENCES
 
Homocysteine thiolactone, an intramolecular thioester of homocysteine, is synthesized by methionyl-tRNA synthetase in an error-editing reaction that prevents translational incorporation of homocysteine into proteins. The synthesis of thiolactone occurs in all human cell types investigated. An increase in homocysteine levels leads to elevation of thiolactone levels in human cells. In cultured human cells and in human serum, homocysteine thiolactone reacts with proteins by a mechanism involving homocysteinylation of protein lysine residues. The homocysteinylation leads to protein damage. A calcium-dependent homocysteine thiolactonase, tightly associated with HDL in human serum, may prevent protein damage by detoxifying thiolactone.


KEY WORDS: • homocysteine thiolactone • homocysteine • protein homocysteinylation • HDL-associated thiolactonase • calcium • atherosclerosis


    INTRODUCTION
 TOP
 ABSTRACT
 INTRODUCTION
 Mechanisms of homocysteine...
 Elevation of Hcy levels...
 Metabolism of Hcy thiolactone...
 Protein homocysteinylation
 HDL-associated Hcy thiolactonase...
 Summary: role of homocysteine...
 REFERENCES
 
Although homocysteine (Hcy)3 thiolactone was obtained by chemical synthesis in the 1930s (Baernstein 1934Citation , Riegel and Du Vigneaud 1935Citation ), the first indication of its biological significance came almost 50 years later with the discovery of enzymatic conversion of Hcy to Hcy thiolactone in error-editing reactions of some aminoacyl-tRNA synthetases (AARS) in vitro (Jakubowski and Fersht 1981Citation ) and in vivo (Jakubowski 1990Citation ). Hcy thiolactone reacts easily with proteins. Protein damage caused by homocysteinylation may underlie the involvement of Hcy in human pathologies such as vascular disease (Jakubowski 1997Citation ).


    Mechanisms of homocysteine thiolactone synthesis
 TOP
 ABSTRACT
 INTRODUCTION
 Mechanisms of homocysteine...
 Elevation of Hcy levels...
 Metabolism of Hcy thiolactone...
 Protein homocysteinylation
 HDL-associated Hcy thiolactonase...
 Summary: role of homocysteine...
 REFERENCES
 
In all cell types, from bacterial to human, Hcy is metabolized to Hcy thiolactone by methionyl-tRNA synthetase (MetRS) (Jakubowski 1990Citation , 1991Citation , 1995Citation and 1997Citation , Jakubowski and Goldman 1993Citation ). Because Hcy thiolactone forms at the active site of MetRS, the synthesis of thiolactone increases with an increase in the Hcy/Met ratio. Two other synthetases, LeuRS and IleRS, can also convert Hcy to the thiolactone under some conditions in bacteria (Jakubowski 1995Citation ). The mechanism of Hcy thiolactone synthesis involves a two-step reaction driven by the hydrolysis of ATP (Jakubowski and Fersht 1981Citation ). In the first step (Eq. 1) , a carboxyl group of Hcy is activated by ATP, forming a MetRS-bound homocysteinyl adenylate.

(1)

In the second step (Eq. 2) , the side chain thiolate of Hcy displaces the AMP group from the activated carboxyl group of Hcy, forming Hcy thiolactone as a product. The energy of the anhydride bond of Hcy~AMP is conserved in the intramolecular thioester bond of Hcy thiolactone.


(2)

Hcy thiolactone is synthesized by human endothelial cells (Table 1Citation ), fibroblasts, breast cancer cells (Table 2Citation ), HeLa cells, as well as by normal BALB/c 3T3 and transformed RAG mouse cells (Jakubowski and Goldman 1993Citation ). MetRS mutants of Chinese hamster ovary cells, defective in the Met binding site of the enzyme, are also defective in Hcy thiolactone synthesis (Jakubowski and Goldman 1993Citation ). Methionine inhibits synthesis of Hcy thiolactone in rodent and human cells (Jakubowski, unpublished data). Because of its mostly neutral character at physiologic pH (pK = 7.1; Anderson and Packer 1974Citation ), Hcy thiolactone diffuses through cell membranes and accumulates in the culture medium (Fig. 1Citation ).


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Table 1. Levels of homocysteine (Hcy) thiolactone, Hcy, protein-Hcy, Met and protein-Met in human umbilical vein endothelial cells1

 

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Table 2. Metabolic conversion of endogenous and exogenous homocysteine (Hcy) into Hcy thiolactone in cultured human cells1

 


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Figure 1. Schematic representation of the metabolism of homocysteine (Hcy) thiolactone in a human cell. When methionine synthase (MS) or cystathionine ß-synthase (CBS) are inhibited, Hcy is converted into Hcy thiolactone by methionyl-tRNA synthetase (MRS) (Jakubowski and Goldman 1993Citation . Hcy thiolactone acylates lysine residues of cellular and extracellular proteins (Jakubowski 1997Citation and 1999bCitation ) or is hydrolyzed to Hcy by a calcium-dependent Hcy thiolactonase (HTase) tightly associated with HDL in serum (Jakubowski 1999aCitation ).

 

    Elevation of Hcy levels leads to enhanced synthesis of the thiolactone
 TOP
 ABSTRACT
 INTRODUCTION
 Mechanisms of homocysteine...
 Elevation of Hcy levels...
 Metabolism of Hcy thiolactone...
 Protein homocysteinylation
 HDL-associated Hcy thiolactonase...
 Summary: role of homocysteine...
 REFERENCES
 
Under normal metabolic conditions, synthesis of Hcy thiolactone in human cells is low because intracellular concentrations of Hcy are relatively low (Table 1)Citation . However, if Hcy levels are increased because of a reduction in its transmethylation and/or transsulfuration, the synthesis of Hcy thiolactone is enhanced. For example, in the absence of folate, human fibroblasts, breast cancer cells and endothelial cells accumulate Hcy and synthesize large amounts of the thiolactone (Table 2)Citation . Thiolactone levels can reach as much as 60% of the metabolized Hcy in extreme cases of intercellular Hcy elevation, such as observed in human endothelial cells maintained on Hcy in Met-free media deprived of vitamin B-12 and folate (Table 2)Citation .


    Metabolism of Hcy thiolactone in human cell cultures and serum
 TOP
 ABSTRACT
 INTRODUCTION
 Mechanisms of homocysteine...
 Elevation of Hcy levels...
 Metabolism of Hcy thiolactone...
 Protein homocysteinylation
 HDL-associated Hcy thiolactonase...
 Summary: role of homocysteine...
 REFERENCES
 
As shown in Figure 1Citation , Hcy thiolactone undergoes the following two major reactions in human cells and serum in vitro: 1) protein homocysteinylation at lysine residues (Jakubowski 1997Citation , 1999aCitation and 1999bCitation ); and 2) enzymatic hydrolysis to Hcy by calcium-dependent Hcy thiolactonase, a component of HDL (Jakubowski 1999aCitation ). Preliminary experiments suggest that protein homocysteinylation may occur in humans. For example, small amounts of Hcy are present in acid hydrolyzates of dithiothreitol (DTT)-treated human serum proteins from normal subjects; more Hcy is recovered from serum proteins from homocysteinuric subjects (Table 3Citation ). Enzymatic hydrolysis of thiolactone to Hcy also occurs in vivo; this was shown by means of dietary supplementation or injection of Hcy thiolactone as a source of Hcy in laboratory animals. Although Hcy thiolactone is eliminated rapidly from blood and cells (the half-life of exogenous Hcy thiolactone is 1 h or less; Donahue et al. 1974Citation , Dudman and Wilken 1981Citation , Dudman et al. 1991Citation , Jakubowski 1997Citation ), small amounts of Hcy are present in human serum proteins (Table 3)Citation . Because of its reactivity, thiolactone is unlikely to be detected in vivo (Donahue et al. 1974Citation , Dudman et al. 1991Citation , Mudd et al. 1989Citation ). In human serum, about half of the exogenous thiolactone incorporated into protein is released as free Hcy after reduction with DTT. The other half represents Hcy attached via an amide bond between its carboxyl group and the amino group of a protein lysine residue (Fig. 2Citation ).


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Table 3. Levels of protein-homocysteine (Hcy) and Hcy in samples of human sera1

 


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Figure 2. Homocysteinylation of protein lysine residues by homocysteine (Hcy) thiolactone.

 

    Protein homocysteinylation
 TOP
 ABSTRACT
 INTRODUCTION
 Mechanisms of homocysteine...
 Elevation of Hcy levels...
 Metabolism of Hcy thiolactone...
 Protein homocysteinylation
 HDL-associated Hcy thiolactonase...
 Summary: role of homocysteine...
 REFERENCES
 
After acid hydrolysis, a small amount of [35S]Hcy was recovered from protein of cultured cells incubated with [35S]Met. More Hcy was recovered from protein when human cells were treated with aminopterin, an antifolate drug that inhibits methionine synthase (Jakubowski 1997Citation ). In recent experiments with [35S]Met-labeled human umbilical vein artery endothelial cells (HUVEC), in which methionine synthase was severely inhibited by deprivation of vitamin B-12 and folate, Hcy incorporation into protein represented up to 36% of Hcy metabolized to Met (Table 2)Citation . When HUVEC were labeled with [35S]Hcy, incorporation of Hcy into protein represented up to 65% of Hcy metabolized to Met (Table 2)Citation . Hcy was present in both cellular and extracellular proteins (Fig. 3Citation , Table 1Citation ). Data suggest that Hcy incorporation into protein is post-translational, reflecting facile homocysteinylation of protein lysine residues by Hcy thiolactone (Fig. 2)Citation . Indeed, phenylthiohydantoin (PTH)-(S-carboxymethyl)homocysteine was recovered from tissue culture proteins subjected to carboxymethylation and Edman degradation (Jakubowski, unpublished data). Translational incorporation of Hcy into protein is unlikely because AARS do not aminoacylate tRNA with Hcy (Jakubowski 1999cCitation and 1999dCitation ).



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Figure 3. Homocysteine (Hcy) is present in proteins from human umbilical vein endothelial cell (HUVEC) cultures. Autoradiograms of two-dimensional TLC separations of [35S]amino acids (Jakubowski 1997Citation ) liberated by acid hydrolysis from dithiothreitol (DTT)-treated cellular (A) and extracellular (B) proteins from HUVEC cultures labeled with 8 µmol/L [35S]Hcy are shown. Hcy liberated from proteins during acid hydrolysis is converted to Hcy thiolactone (HcyT)). HUVEC were grown and labeled as described in the legend to Table 1Citation .

 
Reactions of Hcy thiolactone with protein lysine residues are robust under physiologic conditions (Table 4Citation ). In human serum incubated with the thiolactone, protein homocysteinylation is a major reaction, which could be observed with as little as 10 nmol/L thiolactone. Individual proteins are homocysteinylated at rates proportional to their lysine contents (Jakubowski 1999bCitation ). Examples of time courses of protein homocysteinylation are shown in Figure 4Citation . Homocysteinylation results in protein damage, manifested as loss of function. For example, methionyl-tRNA synthetase (Fig. 5Citation ) and trypsin (Jakubowski 1999bCitation ) are inactivated by homocysteinylation. Lysine oxidase, an important enzyme responsible for post-translational modification essential for the biogenesis of connective tissue matrices, is also inactivated irreversibly by Hcy thiolactone (Liu et al. 1997Citation ).


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Table 4. Second-order rate constants for reactions of Hcy thiolactone with proteins and other compounds1

 


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Figure 4. Time courses of protein homocysteinylation at room temperature. Proteins (10 mg/mL) or lysine (10 mmol/L) were incubated with 10 mmol/L [35S]homocysteine (Hcy) thiolactone in 0.1 mol/L sodium phosphate buffer, pH 7.4. Incorporation of the thiolactone into proteins was determined by treatment with dithiothreitol followed by precipitation with trichloroacetic acid.

 


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Figure 5. Inactivation of methionyl-tRNA synthetase (MetRS) by homocysteinylation. MetRS (10 mg/mL) was incubated with 10 mmol/L [35S]homocysteine thiolactone (HT) in 0.1 mol/L sodium phosphate buffer, pH 7.4. Incorporation of the thiolactone into MetRS was determined by trichloroacetic acid precipitation. Residual enzymatic activity in tRNA aminoacylation with [35S]Met was also determined (Jakubowski 1996Citation ). (A) Time course of inactivation in the absence (-Adds, {square}) and presence of indicated substrates: tRNA (•), Met ({diamond}), or ATP ({diamondsuit}). Control incubation in the absence of Hcy thiolactone is also shown ({circ}). (B) Relationship between the degree of homocysteinylation (Hcy/MetRS, mol/mol) and residual enzymatic activity.

 

    HDL-associated Hcy thiolactonase in human serum
 TOP
 ABSTRACT
 INTRODUCTION
 Mechanisms of homocysteine...
 Elevation of Hcy levels...
 Metabolism of Hcy thiolactone...
 Protein homocysteinylation
 HDL-associated Hcy thiolactonase...
 Summary: role of homocysteine...
 REFERENCES
 
Hcy thiolactone is hydrolyzed to Hcy in human serum by a single enzyme, Hcy thiolactonase, which is present at a concentration of ~50 µg/mL or ~1 µmol/L (Jakubowski 1999aCitation ). The thiolactonase requires calcium for activity and stability, and is associated with the HDL fraction of serum lipoproteins (Table 5Citation ). The enzyme is inhibited noncompetitively by isoleucine (Ki = 2 mmol/L) and penicillamine (Ki = 0.2 mmol/L). In the absence of detergents, the thiolactonase copurifies with apolipoprotein AI. Purification to homogeneity can be achieved only in the presence of nonionic detergents, such as Igepal C-630. Purified Hcy thiolactonase migrates as a protein of molecular weight 45 kDa on denaturing polyacrylamide gels. The enzyme exhibits a remarkable degree of substrate specificity toward Hcy thiolactone. Although homoserine lactone is also a substrate, it is not known to occur in human cells. Other related thioesters, such as N-acetyl-Hcy thiolactone and acetyl-S-coenzyme A, or esters, such as O-acetyl-serine, methyl or ethyl esters of methionine, phenylalanine, alanine, ß-alanine and cysteine, are not substrates. However, the thiolactonase also hydrolyzes nonnatural substrates, such as phenyl acetate, p-nitrophenol acetate and the organophosphate paraoxon (Jakubowski 1999aCitation ). Extensive research has focused on serum arylesterase/paraoxonase, an organophosphate-detoxifying enzyme whose natural substrate and function remain unknown (Mackness et al. 1998Citation ). The thiolactonase and arylesterase/paraoxonase activities comigrate at all steps of purification, suggesting that the three activities represent that same enzyme. These data suggest that thiolactonase/paraoxonase protects proteins against homocysteinylation by detoxifying Hcy thiolactone (Jakubowski 1999aCitation ). The finding that Hcy thiolactonase is tightly associated with HDL also suggests a link between metabolism of Hcy and lipoproteins. This link may explain the recent unexpected finding that paraoxonase prevents atherosclerosis in a mouse model (Shih et al. 1998Citation ).


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Table 5. Homocysteine (Hcy) thiolactonase is associated with HDL in human serum1

 

    Summary: role of homocysteine thiolactone in human disease
 TOP
 ABSTRACT
 INTRODUCTION
 Mechanisms of homocysteine...
 Elevation of Hcy levels...
 Metabolism of Hcy thiolactone...
 Protein homocysteinylation
 HDL-associated Hcy thiolactonase...
 Summary: role of homocysteine...
 REFERENCES
 
Elevated levels of Hcy are an independent risk factor for cardiovascular disease in humans (e.g., Jacobsen 1998Citation ). Available data suggest that Hcy can be harmful to human cells because of its metabolic conversion to Hcy thiolactone, a reactive thioester. This conversion occurs in all human cell types, including endothelial cells. When methionine synthase activity is inhibited by folate or vitamin B-12 deprivation, almost all Hcy is converted to thiolactone. Subsequent inadvertent homocysteinylation of cellular and extracellular proteins by Hcy thiolactone might lead to impaired function. The metabolic conversion of Hcy to Hcy thiolactone, the reactivity of the thiolactone toward proteins and resulting protein damage might explain some pathologic consequences of elevated Hcy levels, including atherosclerosis. The tight association of Hcy thiolactonase with HDL in serum could contribute to the protective role of HDL in the human vascular system.


    FOOTNOTES
 
1 Presented at the symposium entitled "Homocysteine, Aging and Geriatric Disease" as part of the Experimental Biology 99 meeting held April 17–21 in Washington, DC. The proceedings of this symposium are published as a supplement to The Journal of Nutrition. Guest editor for this supplement was Carlos L. Krumdieck, University of Alabama at Birmingham.

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2 Supported by a grant from the National Science Foundation (MCB-9724929).

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3 Abbreviations used: AARS, aminoacyl-tRNA synthetase; DTT, dithiothreitol; Hcy, homocysteine; HUVEC, human umbilical vein artery endothelial cells; MetRS, methionyl-tRNA synthetase; PTH, phenylthiohydantoin.

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    REFERENCES
 TOP
 ABSTRACT
 INTRODUCTION
 Mechanisms of homocysteine...
 Elevation of Hcy levels...
 Metabolism of Hcy thiolactone...
 Protein homocysteinylation
 HDL-associated Hcy thiolactonase...
 Summary: role of homocysteine...
 REFERENCES
 

1. Anderson R. F., Packer J. E. The radiolysis of aqueous solutions of homocysteine thiolactone. Int. J. Radiat. Phys. Chem. 1974;6:33-46

2. Baernstein H. D. A modification of the method for determining methionine in proteins. J. Biol. Chem. 1934;106:451-456[Free Full Text]

3. Donahue S., Sturman J. A., Gaul G. Arteriosclerosis due to homocysteinemia: failure to reproduce the model in weaning rabbits. Am. J. Pathol. 1974;77:167-174[Medline]

4. Dudman N.P.B., Hicks C., Lynch J. F., Wilcken D.E.L., Wang J. Homocysteine thiolactone disposal by human arterial endothelial cells and serum in vitro. Arterioscler. Thromb. 1991;11:663-670[Abstract/Free Full Text]

5. Dudman N.P.B., Wilken D.E.L. Homocysteine thiolactone in experimental homocysteinemia. Biochem. Med. 1981;27:244-253

6. Jacobsen D. W. Homocysteine and vitamins in cardiovascular disease. Clin. Chem. 1998;44:1833-1843[Abstract/Free Full Text]

7. Jakubowski H. Proofreading in vivo: editing of homocysteine by methionyl-tRNA synthetase in Escherichia coli. Proc. Natl. Acad. Sci. U.S.A. 1990;87:4504-4508[Abstract/Free Full Text]

8. Jakubowski H. Proofreading in vivo: editing of homocysteine by methionyl-tRNA synthetase in the yeast Saccharomyces cerevisiae. EMBO J 1991;10:593-598[Medline]

9. Jakubowski H. Proofreading in vivo: editing of homocysteine by aminoacyl-tRNA synthetases in Escherichia coli. J. Biol. Chem. 1995;270:17672-17673[Abstract/Free Full Text]

10. Jakubowski H. The synthetic/editing site of an aminoacyl-tRNA synthetase: evidence for binding of thiols in the editing subsite. Biochemistry 1996;35:8252-8259[Medline]

11. Jakubowski H. Metabolism of homocysteine thiolactone in human cell cultures: possible mechanism for pathological consequences of elevated homocysteine levels. J. Biol. Chem. 1997;272:1935-1942[Abstract/Free Full Text]

12. Jakubowski, H. (1999a) Calcium-dependent human serum homocysteine thiolactone hydrolase: a protective mechanism against protein N-homocysteinylation. J. Biol. Chem. (in press).

13. Jakubowski H. Protein homocysteinylation: possible mechanism underlying pathological consequences of elevated homocysteine levels. FASEB J 1999b;13:2277-2283[Abstract/Free Full Text]

14. Jakubowski H. Misacylation of tRNALys with noncognate amino acids by lysyl-tRNA synthetase. Biochemistry 1999c;38:8088-8093[Medline]

15. Jakubowski H. tRNA synthetase proofreading of amino acids. Encyclopedia of Life Sciences 1999d Macmillan Reference Ltd London, UK. (in press)

16. Jakubowski H., Fersht A. Alternative pathways of rejection of noncognate amino acids by aminoacyl-tRNA synthetases. Nucleic Acids Res 1981;9:3105-3117[Abstract/Free Full Text]

17. Jakubowski H., Goldman E. Synthesis of homocysteine thiolactone by methionyl-tRNA synthetase in cultured mammalian cells. FEBS Lett 1993;317:593-598

18. Liu G., Nellaiappan K., Kagan H. M. Irreversible inhibition of lysyl oxidase by homocysteine thiolactone and its selenium and oxygen analogues. J. Biol. Chem. 1997;272:32370-32377[Abstract/Free Full Text]

19. Mackness B., Durrington P. N., Mackness M. I. Human serum paraoxonase. Gen. Pharmacol. 1998;31:329-336[Medline]

20. Mudd H. S., Matorin A. I., Levy H. L. Homocysteine thiolactone: failure to detect. Res. Commun. Chem. Pathol. Pharmacol. 1989;63:297-300[Medline]

21. Riegel B., Du Vigneaud V. The isolation of homocysteine and its conversion to a thiolactone. J. Biol. Chem. 1935;112:149-154[Free Full Text]

22. Shih D. M., Gu L., Navab M., Li W. F., Hama S., Castellani L. W., Furlong C. E., Costa L. G., Fogelman A. M., Lusis A. J. Mice lacking serum paraoxonase are susceptible to organophosphate toxicity and atherosclerosis. Nature (Lond.) 1998;394:284-287[Medline]




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